Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGMAT | AMD1 | ENSTTRP00000014946 | ENSTTRP00000005837 | Agmatinase, mitochondrial; Belongs to the arginase family. | S-adenosylmethionine decarboxylase proenzyme. | 0.504 |
AGMAT | ARG1 | ENSTTRP00000014946 | ENSTTRP00000010766 | Agmatinase, mitochondrial; Belongs to the arginase family. | Arginase. | 0.652 |
AGMAT | ARG2 | ENSTTRP00000014946 | ENSTTRP00000015005 | Agmatinase, mitochondrial; Belongs to the arginase family. | Arginase. | 0.656 |
AGMAT | ODC1 | ENSTTRP00000014946 | ENSTTRP00000004333 | Agmatinase, mitochondrial; Belongs to the arginase family. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.964 |
AGMAT | PAOX | ENSTTRP00000014946 | ENSTTRP00000014996 | Agmatinase, mitochondrial; Belongs to the arginase family. | Peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X2. | 0.485 |
AGMAT | SMOX | ENSTTRP00000014946 | ENSTTRP00000009415 | Agmatinase, mitochondrial; Belongs to the arginase family. | Spermine oxidase isoform X2. | 0.523 |
AGMAT | SMS | ENSTTRP00000014946 | ENSTTRP00000007432 | Agmatinase, mitochondrial; Belongs to the arginase family. | Spermine synthase. | 0.892 |
AGMAT | SRM | ENSTTRP00000014946 | ENSTTRP00000001239 | Agmatinase, mitochondrial; Belongs to the arginase family. | Spermidine synthase isoform X1; Belongs to the spermidine/spermine synthase family. | 0.967 |
AMD1 | AGMAT | ENSTTRP00000005837 | ENSTTRP00000014946 | S-adenosylmethionine decarboxylase proenzyme. | Agmatinase, mitochondrial; Belongs to the arginase family. | 0.504 |
AMD1 | ARG1 | ENSTTRP00000005837 | ENSTTRP00000010766 | S-adenosylmethionine decarboxylase proenzyme. | Arginase. | 0.401 |
AMD1 | ARG2 | ENSTTRP00000005837 | ENSTTRP00000015005 | S-adenosylmethionine decarboxylase proenzyme. | Arginase. | 0.547 |
AMD1 | MAT2A | ENSTTRP00000005837 | ENSTTRP00000008504 | S-adenosylmethionine decarboxylase proenzyme. | S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. | 0.929 |
AMD1 | MTAP | ENSTTRP00000005837 | ENSTTRP00000008793 | S-adenosylmethionine decarboxylase proenzyme. | S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates. | 0.460 |
AMD1 | ODC1 | ENSTTRP00000005837 | ENSTTRP00000004333 | S-adenosylmethionine decarboxylase proenzyme. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.890 |
AMD1 | PAOX | ENSTTRP00000005837 | ENSTTRP00000014996 | S-adenosylmethionine decarboxylase proenzyme. | Peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X2. | 0.688 |
AMD1 | SMOX | ENSTTRP00000005837 | ENSTTRP00000009415 | S-adenosylmethionine decarboxylase proenzyme. | Spermine oxidase isoform X2. | 0.695 |
AMD1 | SMS | ENSTTRP00000005837 | ENSTTRP00000007432 | S-adenosylmethionine decarboxylase proenzyme. | Spermine synthase. | 0.971 |
AMD1 | SRM | ENSTTRP00000005837 | ENSTTRP00000001239 | S-adenosylmethionine decarboxylase proenzyme. | Spermidine synthase isoform X1; Belongs to the spermidine/spermine synthase family. | 0.971 |
ARG1 | AGMAT | ENSTTRP00000010766 | ENSTTRP00000014946 | Arginase. | Agmatinase, mitochondrial; Belongs to the arginase family. | 0.652 |
ARG1 | AMD1 | ENSTTRP00000010766 | ENSTTRP00000005837 | Arginase. | S-adenosylmethionine decarboxylase proenzyme. | 0.401 |
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