STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM9SF4Transmembrane 9 superfamily member 4. (642 aa)    
Predicted Functional Partners:
C10orf71
Uncharacterized protein C10orf71 homolog.
      
 0.799
OBSL1
Obscurin-like protein 1 isoform X2.
      
 0.791
ANO8
Anoctamin 8.
      
 0.703
RBBP8NL
RBBP8 N-terminal-like protein.
      
 0.687
SEC24C
Protein transport protein Sec24C isoform X2.
   
    0.680
SOX15
Transcription factor SOX-1.
      
 0.660
CABCOCO1
Uncharacterized protein C10orf107 homolog isoform X1.
   
    0.591
PLAGL2
Zinc finger protein PLAGL2 isoform X1.
   
 
 0.590
CELSR3
Cadherin EGF LAG seven-pass G-type receptor 3 isoform X2.
      
 0.576
TOP3A
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
 
      0.564
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.