STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3ATranscription factor IIIA isoform X1. (405 aa)    
Predicted Functional Partners:
GTF3C1
General transcription factor 3C polypeptide 1.
    
 0.771
GTF3C5
General transcription factor IIIC subunit 5.
    
 0.754
BDP1
Transcription factor TFIIIB component B'' homolog isoform X1.
    
 0.745
PPP1R42
Protein phosphatase 1 regulatory subunit 42 isoform X1.
    
 0.701
TTC22
Tetratricopeptide repeat protein 22 isoform X2.
      
 0.691
XPC
DNA repair protein complementing XP-C cells.
     
 0.691
FAM228B
Protein FAM228B.
      
 0.691
LNX2
Ligand of Numb protein X 2 isoform X1.
    
 
 0.690
VPS35L
UPF0505 protein C16orf62 homolog.
      
 0.680
KCTD18
BTB/POZ domain-containing protein KCTD18 isoform X1.
      
 0.672
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.