STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOC4Apolipoprotein C-IV; May participate in lipoprotein metabolism; Belongs to the apolipoprotein C4 family. (127 aa)    
Predicted Functional Partners:
APOA5
Apolipoprotein A-V.
   
 
 0.751
TBPL1
TATA box-binding protein-like protein 1.
      
 0.744
APOA1
Truncated apolipoprotein A-I; Participates in the reverse transport of cholesterol from tissues to the liver for excretion by promoting cholesterol efflux from tissues and by acting as a cofactor for the lecithin cholesterol acyltransferase (LCAT). As part of the SPAP complex, activates spermatozoa motility (By similarity).
   
 
 0.704
SLC10A6
Solute carrier family 10 member 6 isoform X1.
   
  
 0.694
GNPAT
Glyceronephosphate O-acyltransferase.
      
 0.686
PLA2R1
Secretory phospholipase A2 receptor.
      
 0.684
APOC3
Apolipoprotein C-III.
   
  
 0.673
SH2B1
SH2B adapter protein 1.
      
 0.672
SLC10A4
Sodium/bile acid cotransporter 4.
   
  
 0.670
CIB1
Calcium and integrin binding 1.
      
 0.669
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.