STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPEPL1Aminopeptidase like 1. (473 aa)    
Predicted Functional Partners:
STX16-NPEPL1
Syntaxin-16 isoform X3; Belongs to the syntaxin family.
 
 
  
 0.924
RNF145
RING finger protein 145 isoform X3.
      
 0.781
PRPF19
pre-mRNA-processing factor 19.
   
 
 0.774
ZSCAN26
Zinc finger and SCAN domain-containing protein 26-like.
      
 0.763
MMP25
Matrix metalloproteinase-25.
      
 0.723
USP39
U4/U6.U5 tri-snRNP-associated protein 2 isoform X1.
      
 0.717
C20orf85
Uncharacterized protein C20orf85 homolog.
      
 0.699
HIPK3
Homeodomain-interacting protein kinase 3 isoform X1.
    
 
 0.695
NCOA5
Nuclear receptor coactivator 5 isoform X2.
      
 0.692
DDX27
Probable ATP-dependent RNA helicase DDX27; Belongs to the DEAD box helicase family.
     
 0.691
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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