Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BCAN | CHST11 | ENSTTRP00000013753 | ENSTTRP00000005064 | Brevican. | Carbohydrate sulfotransferase. | 0.518 |
BCAN | CHST13 | ENSTTRP00000013753 | ENSTTRP00000004930 | Brevican. | Carbohydrate sulfotransferase. | 0.457 |
BCAN | CHSY1 | ENSTTRP00000013753 | ENSTTRP00000002421 | Brevican. | Hexosyltransferase. | 0.505 |
BCAN | CSGALNACT1 | ENSTTRP00000013753 | ENSTTRP00000001302 | Brevican. | Hexosyltransferase. | 0.693 |
BCAN | CSGALNACT2 | ENSTTRP00000013753 | ENSTTRP00000014418 | Brevican. | Hexosyltransferase. | 0.571 |
BCAN | DCN | ENSTTRP00000013753 | ENSTTRP00000001260 | Brevican. | Decorin; May affect the rate of fibrils formation. | 0.777 |
BCAN | ENSTTRP00000009086 | ENSTTRP00000013753 | ENSTTRP00000009086 | Brevican. | annotation not available | 0.518 |
BCAN | ENSTTRP00000010080 | ENSTTRP00000013753 | ENSTTRP00000010080 | Brevican. | annotation not available | 0.645 |
CHADL | ENSTTRP00000010080 | ENSTTRP00000003146 | ENSTTRP00000010080 | Chondroadherin-like protein isoform X1. | annotation not available | 0.693 |
CHST11 | BCAN | ENSTTRP00000005064 | ENSTTRP00000013753 | Carbohydrate sulfotransferase. | Brevican. | 0.518 |
CHST11 | CHST13 | ENSTTRP00000005064 | ENSTTRP00000004930 | Carbohydrate sulfotransferase. | Carbohydrate sulfotransferase. | 0.774 |
CHST11 | CHST15 | ENSTTRP00000005064 | ENSTTRP00000006865 | Carbohydrate sulfotransferase. | Carbohydrate sulfotransferase 15. | 0.495 |
CHST11 | CSGALNACT1 | ENSTTRP00000005064 | ENSTTRP00000001302 | Carbohydrate sulfotransferase. | Hexosyltransferase. | 0.414 |
CHST11 | CSGALNACT2 | ENSTTRP00000005064 | ENSTTRP00000014418 | Carbohydrate sulfotransferase. | Hexosyltransferase. | 0.479 |
CHST11 | DCN | ENSTTRP00000005064 | ENSTTRP00000001260 | Carbohydrate sulfotransferase. | Decorin; May affect the rate of fibrils formation. | 0.526 |
CHST11 | ENSTTRP00000010080 | ENSTTRP00000005064 | ENSTTRP00000010080 | Carbohydrate sulfotransferase. | annotation not available | 0.776 |
CHST13 | BCAN | ENSTTRP00000004930 | ENSTTRP00000013753 | Carbohydrate sulfotransferase. | Brevican. | 0.457 |
CHST13 | CHST11 | ENSTTRP00000004930 | ENSTTRP00000005064 | Carbohydrate sulfotransferase. | Carbohydrate sulfotransferase. | 0.774 |
CHST13 | CHST15 | ENSTTRP00000004930 | ENSTTRP00000006865 | Carbohydrate sulfotransferase. | Carbohydrate sulfotransferase 15. | 0.418 |
CHST13 | CHSY1 | ENSTTRP00000004930 | ENSTTRP00000002421 | Carbohydrate sulfotransferase. | Hexosyltransferase. | 0.452 |
page 1 of 4