Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARL6 | BBS1 | ENSTTRP00000001509 | ENSTTRP00000016496 | ADP-ribosylation factor-like protein 6; Belongs to the small GTPase superfamily. Arf family. | Bardet-Biedl syndrome 1 protein isoform X11. | 0.999 |
ARL6 | BBS2 | ENSTTRP00000001509 | ENSTTRP00000012855 | ADP-ribosylation factor-like protein 6; Belongs to the small GTPase superfamily. Arf family. | Bardet-Biedl syndrome 2 protein homolog. | 0.965 |
ARL6 | BBS4 | ENSTTRP00000001509 | ENSTTRP00000011163 | ADP-ribosylation factor-like protein 6; Belongs to the small GTPase superfamily. Arf family. | Bardet-Biedl syndrome 4 protein. | 0.960 |
ARL6 | BBS5 | ENSTTRP00000001509 | ENSTTRP00000001992 | ADP-ribosylation factor-like protein 6; Belongs to the small GTPase superfamily. Arf family. | Bardet-Biedl syndrome 5 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. This ciliogenic function is mediated in part by the Rab8 GDP/GTP exchange factor, which localizes to the basal body and contacts the BBSome. Rab8(GTP) enters the primary cilium and promotes extension of the ciliary membrane. Firstly the BBSome associates with the ciliary membrane and binds to RAB3IP/Rabin8, the gua [...] | 0.959 |
ARL6 | BBS7 | ENSTTRP00000001509 | ENSTTRP00000001495 | ADP-ribosylation factor-like protein 6; Belongs to the small GTPase superfamily. Arf family. | Bardet-Biedl syndrome 7 protein. | 0.999 |
ARL6 | BBS9 | ENSTTRP00000001509 | ENSTTRP00000010972 | ADP-ribosylation factor-like protein 6; Belongs to the small GTPase superfamily. Arf family. | Protein PTHB1 isoform X1. | 0.968 |
ARL6 | KLHL41 | ENSTTRP00000001509 | ENSTTRP00000001997 | ADP-ribosylation factor-like protein 6; Belongs to the small GTPase superfamily. Arf family. | Bardet-Biedl syndrome 5 protein isoform X2. | 0.426 |
ARL6 | LZTFL1 | ENSTTRP00000001509 | ENSTTRP00000009091 | ADP-ribosylation factor-like protein 6; Belongs to the small GTPase superfamily. Arf family. | Leucine zipper transcription factor-like protein 1. | 0.761 |
ARL6 | TTC8 | ENSTTRP00000001509 | ENSTTRP00000011169 | ADP-ribosylation factor-like protein 6; Belongs to the small GTPase superfamily. Arf family. | Tetratricopeptide repeat protein 8. | 0.971 |
BBS1 | ARL6 | ENSTTRP00000016496 | ENSTTRP00000001509 | Bardet-Biedl syndrome 1 protein isoform X11. | ADP-ribosylation factor-like protein 6; Belongs to the small GTPase superfamily. Arf family. | 0.999 |
BBS1 | BBS2 | ENSTTRP00000016496 | ENSTTRP00000012855 | Bardet-Biedl syndrome 1 protein isoform X11. | Bardet-Biedl syndrome 2 protein homolog. | 0.999 |
BBS1 | BBS4 | ENSTTRP00000016496 | ENSTTRP00000011163 | Bardet-Biedl syndrome 1 protein isoform X11. | Bardet-Biedl syndrome 4 protein. | 0.999 |
BBS1 | BBS5 | ENSTTRP00000016496 | ENSTTRP00000001992 | Bardet-Biedl syndrome 1 protein isoform X11. | Bardet-Biedl syndrome 5 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. This ciliogenic function is mediated in part by the Rab8 GDP/GTP exchange factor, which localizes to the basal body and contacts the BBSome. Rab8(GTP) enters the primary cilium and promotes extension of the ciliary membrane. Firstly the BBSome associates with the ciliary membrane and binds to RAB3IP/Rabin8, the gua [...] | 0.999 |
BBS1 | BBS7 | ENSTTRP00000016496 | ENSTTRP00000001495 | Bardet-Biedl syndrome 1 protein isoform X11. | Bardet-Biedl syndrome 7 protein. | 0.999 |
BBS1 | BBS9 | ENSTTRP00000016496 | ENSTTRP00000010972 | Bardet-Biedl syndrome 1 protein isoform X11. | Protein PTHB1 isoform X1. | 0.999 |
BBS1 | KLHL41 | ENSTTRP00000016496 | ENSTTRP00000001997 | Bardet-Biedl syndrome 1 protein isoform X11. | Bardet-Biedl syndrome 5 protein isoform X2. | 0.984 |
BBS1 | LZTFL1 | ENSTTRP00000016496 | ENSTTRP00000009091 | Bardet-Biedl syndrome 1 protein isoform X11. | Leucine zipper transcription factor-like protein 1. | 0.904 |
BBS1 | PCM1 | ENSTTRP00000016496 | ENSTTRP00000003215 | Bardet-Biedl syndrome 1 protein isoform X11. | Pericentriolar material 1 protein isoform X10. | 0.502 |
BBS1 | TTC8 | ENSTTRP00000016496 | ENSTTRP00000011169 | Bardet-Biedl syndrome 1 protein isoform X11. | Tetratricopeptide repeat protein 8. | 0.999 |
BBS2 | ARL6 | ENSTTRP00000012855 | ENSTTRP00000001509 | Bardet-Biedl syndrome 2 protein homolog. | ADP-ribosylation factor-like protein 6; Belongs to the small GTPase superfamily. Arf family. | 0.965 |
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