STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RGP1RGP1 homolog, RAB6A GEF complex partner 1. (391 aa)    
Predicted Functional Partners:
RIC1
RAB6A-GEF complex partner protein 1 isoform X1.
    
 0.995
RAB6A
Ras-related protein Rab-6A isoform X1.
    
 0.743
RAB6B
RAB6B, member RAS oncogene family.
    
 0.743
COG8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.721
C1S
Complement C1s subcomponent; Belongs to the peptidase S1 family.
      
 0.711
VPS53
Vacuolar protein sorting-associated protein 53 homolog.
     
 0.704
VPS52
Vacuolar protein sorting-associated protein 52 homolog.
     
 0.697
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.690
VPS54
Vacuolar protein sorting-associated protein 54 isoform X1.
     
 0.679
POMGNT1
Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1.
      
 0.678
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.