STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH20Cadherin-20; Cadherins are calcium-dependent cell adhesion proteins. (801 aa)    
Predicted Functional Partners:
ABT1
Activator of basal transcription 1.
      
 0.700
TCEA2
Transcription elongation factor A protein 2 isoform X3.
      
 0.689
FRMD5
FERM domain-containing protein 5.
      
 0.667
LURAP1L
Leucine rich adaptor protein 1-like.
      
 0.573
CLDND1
Claudin domain-containing protein 1.
      
 0.566
RNF32
RING finger protein 32.
      
 0.565
NIFK
MKI67 FHA domain-interacting nucleolar phosphoprotein.
      
 0.561
TMEM202
Transmembrane protein 202.
      
 0.543
CACNA1E
Voltage-dependent R-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1E gives rise to R-type calcium currents.
      
 0.533
KIRREL3
Kirre like nephrin family adhesion molecule 3.
    
 
 0.528
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.