STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPGRIP1LProtein fantom. (1255 aa)    
Predicted Functional Partners:
NPHP4
Nephrocystin-4.
    
 0.997
TMEM67
Meckelin isoform X1.
   
  
 0.966
TMEM216
Transmembrane protein 216.
   
  
 0.953
NPHP1
Nephrocystin-1 isoform X2.
    
 0.875
TCTN1
Tectonic-1 isoform X1.
      
 0.839
AHI1
Jouberin isoform X1.
     
 0.813
IFT88
Intraflagellar transport protein 88 homolog isoform X1.
   
  
 0.808
TMEM231
Transmembrane protein 231.
      
 0.803
ARL13B
ADP-ribosylation factor-like protein 13B.
      
 0.785
TMEM237
Transmembrane protein 237 isoform X1.
    
 0.784
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.