STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NLRC5Protein NLRC5. (1845 aa)    
Predicted Functional Partners:
CHUK
Inhibitor of nuclear factor kappa-B kinase subunit alpha isoform X1.
    
 0.982
IKBKB
Inhibitor of nuclear factor kappa-B kinase subunit beta.
    
 0.976
USP14
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
    
 0.928
TAP1
Antigen peptide transporter 1.
   
  
 0.789
NLRC4
NLR family CARD domain-containing protein 4 isoform X1.
    
 
 0.786
PYCARD
PYD and CARD domain containing.
   
 0.762
PSMB9
Proteasome subunit beta.
   
  
 0.683
IRF1
Interferon regulatory factor.
   
  
 0.667
RPS27A
ubiquitin-40S ribosomal protein S27a.
    
  0.644
RFXANK
DNA-binding protein RFXANK isoform X1.
   
 0.643
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.