Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARHGAP29 | ARHGEF37 | ENSTTRP00000000866 | ENSTTRP00000007985 | Rho GTPase-activating protein 29 isoform X2. | Rho guanine nucleotide exchange factor 37 isoform X3. | 0.602 |
ARHGAP29 | DNMBP | ENSTTRP00000000866 | ENSTTRP00000011260 | Rho GTPase-activating protein 29 isoform X2. | Dynamin-binding protein isoform X1. | 0.592 |
ARHGAP29 | FCHSD1 | ENSTTRP00000000866 | ENSTTRP00000013031 | Rho GTPase-activating protein 29 isoform X2. | F-BAR and double SH3 domains protein 1 isoform X3. | 0.528 |
ARHGAP29 | STK10 | ENSTTRP00000000866 | ENSTTRP00000012265 | Rho GTPase-activating protein 29 isoform X2. | Serine/threonine-protein kinase 10 isoform X1. | 0.583 |
ARHGAP4 | ARHGEF37 | ENSTTRP00000007053 | ENSTTRP00000007985 | Rho GTPase-activating protein 4. | Rho guanine nucleotide exchange factor 37 isoform X3. | 0.683 |
ARHGAP4 | DNMBP | ENSTTRP00000007053 | ENSTTRP00000011260 | Rho GTPase-activating protein 4. | Dynamin-binding protein isoform X1. | 0.593 |
ARHGAP4 | STK10 | ENSTTRP00000007053 | ENSTTRP00000012265 | Rho GTPase-activating protein 4. | Serine/threonine-protein kinase 10 isoform X1. | 0.663 |
ARHGEF37 | ARHGAP29 | ENSTTRP00000007985 | ENSTTRP00000000866 | Rho guanine nucleotide exchange factor 37 isoform X3. | Rho GTPase-activating protein 29 isoform X2. | 0.602 |
ARHGEF37 | ARHGAP4 | ENSTTRP00000007985 | ENSTTRP00000007053 | Rho guanine nucleotide exchange factor 37 isoform X3. | Rho GTPase-activating protein 4. | 0.683 |
ARHGEF37 | FCHSD1 | ENSTTRP00000007985 | ENSTTRP00000013031 | Rho guanine nucleotide exchange factor 37 isoform X3. | F-BAR and double SH3 domains protein 1 isoform X3. | 0.692 |
ARHGEF37 | STK10 | ENSTTRP00000007985 | ENSTTRP00000012265 | Rho guanine nucleotide exchange factor 37 isoform X3. | Serine/threonine-protein kinase 10 isoform X1. | 0.672 |
DNMBP | ARHGAP29 | ENSTTRP00000011260 | ENSTTRP00000000866 | Dynamin-binding protein isoform X1. | Rho GTPase-activating protein 29 isoform X2. | 0.592 |
DNMBP | ARHGAP4 | ENSTTRP00000011260 | ENSTTRP00000007053 | Dynamin-binding protein isoform X1. | Rho GTPase-activating protein 4. | 0.593 |
DNMBP | FCHSD1 | ENSTTRP00000011260 | ENSTTRP00000013031 | Dynamin-binding protein isoform X1. | F-BAR and double SH3 domains protein 1 isoform X3. | 0.688 |
DNMBP | STK10 | ENSTTRP00000011260 | ENSTTRP00000012265 | Dynamin-binding protein isoform X1. | Serine/threonine-protein kinase 10 isoform X1. | 0.668 |
FCHSD1 | ARHGAP29 | ENSTTRP00000013031 | ENSTTRP00000000866 | F-BAR and double SH3 domains protein 1 isoform X3. | Rho GTPase-activating protein 29 isoform X2. | 0.528 |
FCHSD1 | ARHGEF37 | ENSTTRP00000013031 | ENSTTRP00000007985 | F-BAR and double SH3 domains protein 1 isoform X3. | Rho guanine nucleotide exchange factor 37 isoform X3. | 0.692 |
FCHSD1 | DNMBP | ENSTTRP00000013031 | ENSTTRP00000011260 | F-BAR and double SH3 domains protein 1 isoform X3. | Dynamin-binding protein isoform X1. | 0.688 |
FCHSD1 | STK10 | ENSTTRP00000013031 | ENSTTRP00000012265 | F-BAR and double SH3 domains protein 1 isoform X3. | Serine/threonine-protein kinase 10 isoform X1. | 0.672 |
MTIF3 | NUP93 | ENSTTRP00000008096 | ENSTTRP00000004070 | Translation initiation factor IF-3, mitochondrial isoform X1. | Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. | 0.517 |
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