STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUSD1Sushi domain-containing protein 1 isoform X1. (753 aa)    
Predicted Functional Partners:
TBC1D9B
TBC1 domain family member 9B isoform X1.
      
 0.816
AP5M1
AP-5 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
      
 0.812
SUSD2
Sushi domain-containing protein 2.
      
 0.802
CCDC115
Coiled-coil domain-containing protein 115 isoform X2.
    
 
 0.793
HSPA4L
Heat shock 70 kDa protein 4L.
    
 
 0.780
SPG11
Spatacsin isoform X2.
      
 0.771
GMFB
Glia maturation factor; Belongs to the actin-binding proteins ADF family. GMF subfamily.
      
 0.769
CNKSR2
Connector enhancer of kinase suppressor of ras 2 isoform X1.
      
 0.761
ATP6V1G2
V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
      
 0.751
CNTN3
Contactin-3.
    
 
 0.744
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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