STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H8Zinc finger CCCH domain-containing protein 8 isoform X1. (308 aa)    
Predicted Functional Partners:
ICE2
Little elongation complex subunit 2 isoform X2.
     
 0.979
ICE1
Little elongation complex subunit 1 isoform X2.
   
 
 0.966
CPSF1
Cleavage and polyadenylation specificity factor subunit 1.
    
 0.883
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.883
SYMPK
Symplekin.
   
 0.883
FIP1L1
pre-mRNA 3'-end-processing factor FIP1 isoform X4.
    
 0.883
CSTF3
Cleavage stimulation factor subunit 3 isoform X1.
    
 0.880
CPSF3
Cleavage and polyadenylation specificity factor subunit 3 isoform X5.
   
 0.873
CSTF1
Cleavage stimulation factor subunit 1.
    
 0.872
NUDT21
Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]
    
 0.871
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.