STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPC4APShort transient receptor potential channel 4-associated protein. (780 aa)    
Predicted Functional Partners:
DDB1
DNA damage-binding protein 1 isoform X1.
    
 
 0.827
EDEM1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
 
 
 
 0.813
EDEM2
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
 
 
 
 0.801
DCAF4
DDB1- and CUL4-associated factor 4 isoform X2.
   
  
 0.796
DCAF5
DDB1- and CUL4-associated factor 5 isoform X1.
      
 0.779
EDEM3
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
 
   
  0.748
DCAF6
DDB1- and CUL4-associated factor 6 isoform X1.
    
 
 0.746
CUL4A
cullin-4A isoform X1; Belongs to the cullin family.
    
 
 0.688
MTRF1L
Peptide chain release factor 1-like, mitochondrial isoform X1.
      
 0.684
ARHGAP25
Rho GTPase-activating protein 25 isoform X2.
      
 0.683
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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