STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APLFAprataxin and PNK-like factor isoform X2. (510 aa)    
Predicted Functional Partners:
XRCC5
X-ray repair cross-complementing protein 5 isoform X1.
    
 
 0.945
XRCC6
X-ray repair cross-complementing protein 6 isoform X2.
    
 
 0.939
XRCC1
DNA repair protein XRCC1 isoform X1.
    
 
 0.922
PARP1
Poly [ADP-ribose] polymerase 1.
    
 
 0.867
LIG4
DNA ligase.
    
 
 0.854
KRT222
Keratin-like protein KRT222; Belongs to the intermediate filament family.
      
 0.836
PARP3
Poly [ADP-ribose] polymerase.
    
 
 0.812
ZBTB24
Zinc finger and BTB domain-containing protein 24 isoform X1.
    
 
 0.799
LIG3
DNA ligase.
    
 
 0.766
ZFAND6
AN1-type zinc finger protein 6 isoform X2.
      
 0.764
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.