STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHBDD1Rhomboid-related protein 4. (315 aa)    
Predicted Functional Partners:
VCP
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 
 0.896
POPDC2
Popeye domain-containing protein 2 isoform X2.
    
 
 0.797
TMEM214
Transmembrane protein 214.
      
 0.785
KLHL31
Kelch-like protein 31.
      
 0.781
TMEM70
Transmembrane protein 70, mitochondrial.
      
 0.773
CDCA3
Cell division cycle-associated protein 3.
      
 0.721
TMEM38A
Trimeric intracellular cation channel type A.
      
 0.719
TMEM161A
LOW QUALITY PROTEIN: transmembrane protein 161A.
      
 0.692
CKAP4
Cytoskeleton-associated protein 4.
    
 
 0.686
ACAP2
arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 isoform X1.
      
 0.680
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.