STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASGEF1ARasGEF domain family member 1A. (488 aa)    
Predicted Functional Partners:
PIWIL1
Piwi-like protein 1; Belongs to the argonaute family.
      
 0.678
ALDH1A1
Retinal dehydrogenase 1; Belongs to the aldehyde dehydrogenase family.
      
 0.655
SULF2
Sulfatase 2.
      
 0.572
ZNHIT6
Box C/D snoRNA protein 1.
      
 0.562
PLA2R1
Secretory phospholipase A2 receptor.
      
 0.562
ATP6V1C2
V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
      
 0.560
GLIPR2
Golgi-associated plant pathogenesis-related protein 1.
      
 0.559
PLEKHG1
Pleckstrin homology domain-containing family G member 1 isoform X2.
      
 0.556
CSTF2
Cleavage stimulation factor subunit 2.
      
 0.552
KLHL5
Kelch-like protein 5 isoform X2.
      
 0.550
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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