STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERMNErmin isoform X2. (289 aa)    
Predicted Functional Partners:
LTN1
E3 ubiquitin-protein ligase listerin isoform X1.
    
 
 0.890
OPALIN
Opalin.
   
  
 0.877
CUL7
Cullin-7; Belongs to the cullin family.
    
   0.803
MRPL2
39S ribosomal protein L2, mitochondrial.
    
   0.803
RPL8
60S ribosomal protein L8.
    
   0.803
RPL5
60S ribosomal protein L5 isoform X1.
    
   0.798
RPL11
Ribosomal protein L11.
   
   0.797
RPL23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
   0.791
MED1
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
   0.729
RPL9
60S ribosomal protein L9.
    
   0.729
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.