STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAP30BPSAP30 binding protein. (307 aa)    
Predicted Functional Partners:
RBL1
Retinoblastoma-like protein 1 isoform X2.
      
 0.800
SUDS3
Sin3 histone deacetylase corepressor complex component SDS3 isoform X3.
   
 
 0.771
PUF60
poly(U)-binding-splicing factor PUF60.
   
   0.717
HIP1R
Huntingtin interacting protein 1 related.
      
 0.668
EIF2B2
Translation initiation factor eIF-2B subunit beta; Belongs to the eIF-2B alpha/beta/delta subunits family.
 
 
    0.596
SAP30
Histone deacetylase complex subunit SAP30 isoform X1.
     
 0.583
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
   
 
  0.579
ARID4A
AT-rich interactive domain-containing protein 4A isoform X2.
   
 
  0.579
HNRNPL
Heterogeneous nuclear ribonucleoprotein L isoform X1.
   
  
 0.573
SAP18
Histone deacetylase complex subunit SAP18.
   
 
  0.571
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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