Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AK9 | ENSTTRP00000003942 | ENSTTRP00000003943 | ENSTTRP00000003942 | Adenylate kinase 9. | annotation not available | 0.998 |
AK9 | GP5 | ENSTTRP00000003943 | ENSTTRP00000003429 | Adenylate kinase 9. | Platelet glycoprotein V. | 0.436 |
AK9 | ZBTB7B | ENSTTRP00000003943 | ENSTTRP00000015328 | Adenylate kinase 9. | Zinc finger and BTB domain containing 7B. | 0.605 |
BANF1 | ZBTB7B | ENSTTRP00000008281 | ENSTTRP00000015328 | Barrier-to-autointegration factor. | Zinc finger and BTB domain containing 7B. | 0.549 |
DNTT | SOX13 | ENSTTRP00000015102 | ENSTTRP00000008315 | DNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator. | SRY-box transcription factor 13. | 0.495 |
DNTT | ZBTB7B | ENSTTRP00000015102 | ENSTTRP00000015328 | DNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator. | Zinc finger and BTB domain containing 7B. | 0.745 |
ENSTTRP00000003942 | AK9 | ENSTTRP00000003942 | ENSTTRP00000003943 | annotation not available | Adenylate kinase 9. | 0.998 |
ENSTTRP00000003942 | GP5 | ENSTTRP00000003942 | ENSTTRP00000003429 | annotation not available | Platelet glycoprotein V. | 0.436 |
ENSTTRP00000003942 | ZBTB7B | ENSTTRP00000003942 | ENSTTRP00000015328 | annotation not available | Zinc finger and BTB domain containing 7B. | 0.605 |
GP5 | AK9 | ENSTTRP00000003429 | ENSTTRP00000003943 | Platelet glycoprotein V. | Adenylate kinase 9. | 0.436 |
GP5 | ENSTTRP00000003942 | ENSTTRP00000003429 | ENSTTRP00000003942 | Platelet glycoprotein V. | annotation not available | 0.436 |
GP5 | RAB25 | ENSTTRP00000003429 | ENSTTRP00000012660 | Platelet glycoprotein V. | RAB25, member RAS oncogene family. | 0.613 |
GP5 | ZBTB7B | ENSTTRP00000003429 | ENSTTRP00000015328 | Platelet glycoprotein V. | Zinc finger and BTB domain containing 7B. | 0.510 |
HNRNPU | ZBTB7B | ENSTTRP00000004982 | ENSTTRP00000015328 | Heterogeneous nuclear ribonucleoprotein U isoform X1. | Zinc finger and BTB domain containing 7B. | 0.553 |
NKX2-6 | ZBTB7B | ENSTTRP00000011698 | ENSTTRP00000015328 | Homeobox protein Nkx-2.6. | Zinc finger and BTB domain containing 7B. | 0.510 |
RAB25 | GP5 | ENSTTRP00000012660 | ENSTTRP00000003429 | RAB25, member RAS oncogene family. | Platelet glycoprotein V. | 0.613 |
RAB25 | ZBTB7B | ENSTTRP00000012660 | ENSTTRP00000015328 | RAB25, member RAS oncogene family. | Zinc finger and BTB domain containing 7B. | 0.704 |
RUNX3 | ZBTB7B | ENSTTRP00000008900 | ENSTTRP00000015328 | Runt-related transcription factor 3. | Zinc finger and BTB domain containing 7B. | 0.519 |
SOX13 | DNTT | ENSTTRP00000008315 | ENSTTRP00000015102 | SRY-box transcription factor 13. | DNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator. | 0.495 |
SOX13 | ZBTB7B | ENSTTRP00000008315 | ENSTTRP00000015328 | SRY-box transcription factor 13. | Zinc finger and BTB domain containing 7B. | 0.523 |
page 1 of 2