STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTSHCathepsin H. (335 aa)    
Predicted Functional Partners:
SFTPC
Pulmonary surfactant-associated protein C.
     
 0.950
BCL2
Apoptosis regulator Bcl-2 isoform X1.
   
 
  0.898
ENSTTRP00000015100
annotation not available
   
 
 0.862
BIRC2
Baculoviral IAP repeat-containing protein 2.
     
 0.855
BIRC3
Baculoviral IAP repeat-containing protein 3.
     
 0.855
SFTPB
Surfactant protein B.
   
 
 0.855
XIAP
E3 ubiquitin-protein ligase XIAP isoform X2.
     
 0.852
BIRC5
Baculoviral IAP repeat-containing protein 5.
     
 0.852
ENSTTRP00000014090
annotation not available
   
 0.828
CTSB
Cathepsin B isoform X1; Belongs to the peptidase C1 family.
  
0.749
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.