STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUSD5Sushi domain-containing protein 5. (700 aa)    
Predicted Functional Partners:
GLT8D2
Glycosyltransferase 8 domain-containing protein 2 isoform X1.
      
 0.719
SNED1
Sushi, nidogen and EGF-like domain-containing protein 1.
    
 
 0.715
FIBIN
Fin bud initiation factor homolog.
      
 0.670
FANCM
Fanconi anemia group M protein isoform X1.
    
 0.653
POLD2
DNA polymerase delta subunit 2.
    
 0.636
LOC101330346
Survival motor neuron protein.
    
 0.585
MUS81
MUS81 structure-specific endonuclease subunit.
    
 0.569
POLD1
LOW QUALITY PROTEIN: DNA polymerase delta catalytic subunit.
   
 0.561
SNRPD1
Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.
    
 0.557
OR51E2
Olfactory receptor.
      
 0.556
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.