STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRIF1Ligand-dependent nuclear receptor-interacting factor 1 isoform X1. (761 aa)    
Predicted Functional Partners:
RMND5A
Protein RMD5 homolog A isoform X1.
      
 0.736
HERC2
E3 ubiquitin-protein ligase HERC2 isoform X7.
      
 0.712
RANBP10
Ran-binding protein 10.
      
 0.709
CACYBP
Calcyclin-binding protein isoform X1.
      
 0.687
NEK4
Serine/threonine-protein kinase Nek4 isoform X1.
      
 0.676
SRPK2
SRSF protein kinase 2 isoform X7.
      
 0.668
ENSTTRP00000007825
annotation not available
    
 
 0.601
SMCHD1
Structural maintenance of chromosomes flexible hinge domain-containing protein 1.
    
 
 0.601
S100A12
Protein S100-A12; Belongs to the S-100 family.
    
 
 0.563
TMIGD3
LOW QUALITY PROTEIN: transmembrane and immunoglobulin domain containing 3.
      
 0.562
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.