STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLX4Structure-specific endonuclease subunit SLX4. (1815 aa)    
Predicted Functional Partners:
EPRS1
Bifunctional glutamate/proline--tRNA ligase isoform X2.
  
 0.999
ENSTTRP00000005232
annotation not available
   
 0.997
ERCC4
DNA repair endonuclease XPF.
   
 0.993
MUS81
MUS81 structure-specific endonuclease subunit.
   
 0.991
ERCC1
ERCC excision repair 1, endonuclease non-catalytic subunit.
   
 0.974
FANCM
Fanconi anemia group M protein isoform X1.
   
 0.958
WRN
Werner syndrome ATP-dependent helicase isoform X2.
   
 0.957
YARS1
Tyrosine--tRNA ligase.
  
 
 0.951
GATB
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
  
 0.946
EME1
Crossover junction endonuclease EME1 isoform X1.
    
 0.941
Your Current Organism:
Tursiops truncatus
NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin
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