SEL91447.1 protein (Pasteurella skyensis) - STRING interaction network

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Score

SEL91447.1

tRNA pseudouridine65 synthase. (242 aa)

Predicted Functional Partners:

SEL91416.1

0.876

SEM15160.1

0.492

truD

0.455

SEM38655.1

0.417

rplQ

0.413

rsfS

0.406

Your Current Organism:

Pasteurella skyensis

NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SEL91416.1	SEL91447.1	SAMN05444853_101139	SAMN05444853_101140	Uncharacterized conserved protein YqcC, DUF446 family.	tRNA pseudouridine65 synthase.	0.876
SEL91447.1	SEL91416.1	SAMN05444853_101140	SAMN05444853_101139	tRNA pseudouridine65 synthase.	Uncharacterized conserved protein YqcC, DUF446 family.	0.876
SEL91447.1	SEM15160.1	SAMN05444853_101140	SAMN05444853_10679	tRNA pseudouridine65 synthase.	RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.492
SEL91447.1	SEM38655.1	SAMN05444853_101140	SAMN05444853_11515	tRNA pseudouridine65 synthase.	16S rRNA pseudouridine516 synthase; Belongs to the pseudouridine synthase RsuA family.	0.417
SEL91447.1	rplQ	SAMN05444853_101140	SAMN05444853_102147	tRNA pseudouridine65 synthase.	Large subunit ribosomal protein L17.	0.413
SEL91447.1	rsfS	SAMN05444853_101140	SAMN05444853_12620	tRNA pseudouridine65 synthase.	Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.406
SEL91447.1	truD	SAMN05444853_101140	SAMN05444853_103123	tRNA pseudouridine65 synthase.	tRNA pseudouridine13 synthase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.	0.455
SEM15160.1	SEL91447.1	SAMN05444853_10679	SAMN05444853_101140	RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	tRNA pseudouridine65 synthase.	0.492
SEM15160.1	rplQ	SAMN05444853_10679	SAMN05444853_102147	RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Large subunit ribosomal protein L17.	0.596
SEM15160.1	rsfS	SAMN05444853_10679	SAMN05444853_12620	RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.584
SEM15160.1	truD	SAMN05444853_10679	SAMN05444853_103123	RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	tRNA pseudouridine13 synthase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.	0.511
SEM38655.1	SEL91447.1	SAMN05444853_11515	SAMN05444853_101140	16S rRNA pseudouridine516 synthase; Belongs to the pseudouridine synthase RsuA family.	tRNA pseudouridine65 synthase.	0.417
SEM38655.1	truD	SAMN05444853_11515	SAMN05444853_103123	16S rRNA pseudouridine516 synthase; Belongs to the pseudouridine synthase RsuA family.	tRNA pseudouridine13 synthase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.	0.411
rplQ	SEL91447.1	SAMN05444853_102147	SAMN05444853_101140	Large subunit ribosomal protein L17.	tRNA pseudouridine65 synthase.	0.413
rplQ	SEM15160.1	SAMN05444853_102147	SAMN05444853_10679	Large subunit ribosomal protein L17.	RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.596
rplQ	rsfS	SAMN05444853_102147	SAMN05444853_12620	Large subunit ribosomal protein L17.	Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.790
rplQ	truD	SAMN05444853_102147	SAMN05444853_103123	Large subunit ribosomal protein L17.	tRNA pseudouridine13 synthase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.	0.628
rsfS	SEL91447.1	SAMN05444853_12620	SAMN05444853_101140	Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	tRNA pseudouridine65 synthase.	0.406
rsfS	SEM15160.1	SAMN05444853_12620	SAMN05444853_10679	Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.584
rsfS	rplQ	SAMN05444853_12620	SAMN05444853_102147	Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	Large subunit ribosomal protein L17.	0.790