Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM10750.1 | cmk | SAMN05444853_10547 | SAMN05444853_101168 | ATP diphosphatase. | Cytidylate kinase. | 0.901 |
SEM10750.1 | ndk | SAMN05444853_10547 | SAMN05444853_11844 | ATP diphosphatase. | Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.900 |
SEM10750.1 | surE | SAMN05444853_10547 | SAMN05444853_103127 | ATP diphosphatase. | 5'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.900 |
SEM10750.1 | udk | SAMN05444853_10547 | SAMN05444853_11122 | ATP diphosphatase. | Uridine kinase. | 0.901 |
SEM17653.1 | SEM17681.1 | SAMN05444853_10755 | SAMN05444853_10756 | Ribonucleoside-diphosphate reductase beta chain. | Ribonucleoside-diphosphate reductase alpha chain. | 0.998 |
SEM17653.1 | SEM26458.1 | SAMN05444853_10755 | SAMN05444853_11052 | Ribonucleoside-diphosphate reductase beta chain. | Ribonucleoside-diphosphate reductase class Ia beta subunit. | 0.900 |
SEM17653.1 | SEM26708.1 | SAMN05444853_10755 | SAMN05444853_11061 | Ribonucleoside-diphosphate reductase beta chain. | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.980 |
SEM17653.1 | cmk | SAMN05444853_10755 | SAMN05444853_101168 | Ribonucleoside-diphosphate reductase beta chain. | Cytidylate kinase. | 0.911 |
SEM17653.1 | ndk | SAMN05444853_10755 | SAMN05444853_11844 | Ribonucleoside-diphosphate reductase beta chain. | Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.903 |
SEM17681.1 | SEM17653.1 | SAMN05444853_10756 | SAMN05444853_10755 | Ribonucleoside-diphosphate reductase alpha chain. | Ribonucleoside-diphosphate reductase beta chain. | 0.998 |
SEM17681.1 | SEM26458.1 | SAMN05444853_10756 | SAMN05444853_11052 | Ribonucleoside-diphosphate reductase alpha chain. | Ribonucleoside-diphosphate reductase class Ia beta subunit. | 0.980 |
SEM17681.1 | SEM26708.1 | SAMN05444853_10756 | SAMN05444853_11061 | Ribonucleoside-diphosphate reductase alpha chain. | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.900 |
SEM17681.1 | cmk | SAMN05444853_10756 | SAMN05444853_101168 | Ribonucleoside-diphosphate reductase alpha chain. | Cytidylate kinase. | 0.911 |
SEM17681.1 | ndk | SAMN05444853_10756 | SAMN05444853_11844 | Ribonucleoside-diphosphate reductase alpha chain. | Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.904 |
SEM26458.1 | SEM17653.1 | SAMN05444853_11052 | SAMN05444853_10755 | Ribonucleoside-diphosphate reductase class Ia beta subunit. | Ribonucleoside-diphosphate reductase beta chain. | 0.900 |
SEM26458.1 | SEM17681.1 | SAMN05444853_11052 | SAMN05444853_10756 | Ribonucleoside-diphosphate reductase class Ia beta subunit. | Ribonucleoside-diphosphate reductase alpha chain. | 0.980 |
SEM26458.1 | SEM26708.1 | SAMN05444853_11052 | SAMN05444853_11061 | Ribonucleoside-diphosphate reductase class Ia beta subunit. | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.995 |
SEM26458.1 | cmk | SAMN05444853_11052 | SAMN05444853_101168 | Ribonucleoside-diphosphate reductase class Ia beta subunit. | Cytidylate kinase. | 0.911 |
SEM26458.1 | ndk | SAMN05444853_11052 | SAMN05444853_11844 | Ribonucleoside-diphosphate reductase class Ia beta subunit. | Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.903 |
SEM26708.1 | SEM17653.1 | SAMN05444853_11061 | SAMN05444853_10755 | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Ribonucleoside-diphosphate reductase beta chain. | 0.980 |
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