Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEL87788.1Ribosomal protein S12 methylthiotransferase accessory factor. (587 aa)    
Predicted Functional Partners:
SEM30006.1
Chaperone TorD involved in molybdoenzyme TorA maturation.
  
     0.549
SEL87816.1
Ribonuclease G.
       0.511
matP
Hypothetical protein; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.
  
     0.511
SEM12165.1
Nitroreductase / dihydropteridine reductase.
  
  
 0.507
SEM24994.1
Nitroreductase.
  
  
 0.507
SEM29473.1
Nitroreductase.
  
  
 0.507
corA
Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
  
     0.487
SEL87918.1
tRNA A37 threonylcarbamoyladenosine dehydratase.
 
     0.469
SEL91651.1
ABC-2 type transport system permease protein.
  
  
 0.463
SEM01013.1
ABC-2 type transport system permease protein.
  
  
 0.463
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.