Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEL88962.1Manganese/iron transport system permease protein. (283 aa)    
Predicted Functional Partners:
SEL89017.1
Manganese/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
 0.997
SEL88983.1
Manganese/iron transport system ATP-binding protein.
 
 
 0.992
SEL88938.1
Manganese/iron transport system permease protein.
 
  
 
0.968
znuC
Zinc transport system ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
 
 0.874
SEL97450.1
Zinc transport system substrate-binding protein.
 
  
 0.625
SEL89042.1
Histidine triad (HIT) family protein.
       0.498
SEL89072.1
Uncharacterized conserved protein YcfL.
       0.483
ZnuB
Zinc transport system permease protein.
  
  
 
0.472
SEL89103.1
Thiamine kinase.
       0.468
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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