Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEL87918.1tRNA A37 threonylcarbamoyladenosine dehydratase. (255 aa)    
Predicted Functional Partners:
SEL87889.1
Hypothetical protein.
       0.773
SEL87862.1
ATP-binding cassette, subfamily F, uup.
  
    0.752
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
       0.590
SEM50902.1
Adenylyltransferase and sulfurtransferase.
 
 
0.544
SEL87816.1
Ribonuclease G.
       0.474
SEL87788.1
Ribosomal protein S12 methylthiotransferase accessory factor.
 
     0.469
SEM10310.1
tRNA(Met) cytidine acetyltransferase.
   
    0.438
SEM25676.1
TatD DNase family protein.
 
     0.411
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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