Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEL89774.1LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor. (331 aa)    
Predicted Functional Partners:
SEM22339.1
Glutamate synthase (NADPH/NADH) large chain.
    
 
 0.736
SEM26729.1
PTS hybrid protein.
   
 
 0.730
SEL89790.1
Conserved hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.648
SEL89807.1
2-iminobutanoate/2-iminopropanoate deaminase.
       0.648
SEL89827.1
Glutamine amidotransferase.
       0.543
SEM20151.1
Two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB.
    
 
 0.481
ZnuB
Zinc transport system permease protein.
       0.404
znuC
Zinc transport system ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
       0.402
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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