STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL95612.1Ribose transport system ATP-binding protein. (505 aa)    
Predicted Functional Partners:
SEL95643.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.982
SEL95675.1
Ribose transport system substrate-binding protein.
 
  
  0.964
SEM26577.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  0.930
SEM26550.1
Ribose transport system ATP-binding protein.
  
  
 
0.919
SEM26526.1
Ribose transport system substrate-binding protein.
 
  
  0.830
SEM20078.1
Inositol transport system permease protein.
     0.742
SEL97039.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
     0.705
SEM46930.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.683
dlgD
3-dehydro-L-gulonate 2-dehydrogenase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate.
       0.653
SEM51589.1
Methyl-galactoside transport system permease protein.
     0.631
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.