STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL94475.1Glutaredoxin-family domain-containing protein. (243 aa)    
Predicted Functional Partners:
SEM14769.1
Glutathione reductase (NADPH).
 
 0.957
SEM11943.1
Glutathione S-transferase; Belongs to the GST superfamily.
  
 0.934
SEM57961.1
Glutathione S-transferase.
  
 0.933
SEL89458.1
Thiol-disulfide isomerase or thioredoxin.
  
 0.867
SEM51247.1
Cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE.
  
 0.867
msrA
Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 
 0.798
SEM17681.1
Ribonucleoside-diphosphate reductase alpha chain.
  
 0.721
SEM26708.1
Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 0.721
SEM17535.1
Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
  
 
  0.692
SEL94497.1
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family.
 
   
 0.680
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.