STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEL97039.1Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (326 aa)    
Predicted Functional Partners:
rbsA
Ribose transport system ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
   0.956
SEL97067.1
Ribose transport system substrate-binding protein.
 
   0.889
SEM26526.1
Ribose transport system substrate-binding protein.
   0.838
SEM26550.1
Ribose transport system ATP-binding protein.
   0.836
SEM19995.1
Inositol transport system substrate-binding protein.
   0.828
SEM20026.1
Inositol transport system substrate-binding protein.
   0.827
SEM20052.1
Inositol transport system ATP-binding protein.
   0.821
SEM51616.1
Methyl-galactoside transport system ATP-binding protein.
   0.797
SEM01419.1
AI-2 transport system ATP-binding protein.
   0.753
SEM46997.1
Simple sugar transport system ATP-binding protein.
     0.735
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.