Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM03189.1 | SEM03215.1 | SAMN05444853_103124 | SAMN05444853_103125 | Lipoprotein NlpD. | Lipoprotein NlpD. | 0.709 |
SEM03189.1 | SEM03239.1 | SAMN05444853_103124 | SAMN05444853_103126 | Lipoprotein NlpD. | Membrane protein YqaA, SNARE-associated domain. | 0.673 |
SEM03189.1 | SEM03279.1 | SAMN05444853_103124 | SAMN05444853_103128 | Lipoprotein NlpD. | Fic family protein. | 0.507 |
SEM03189.1 | surE | SAMN05444853_103124 | SAMN05444853_103127 | Lipoprotein NlpD. | 5'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.732 |
SEM03215.1 | SEM03189.1 | SAMN05444853_103125 | SAMN05444853_103124 | Lipoprotein NlpD. | Lipoprotein NlpD. | 0.709 |
SEM03215.1 | SEM03239.1 | SAMN05444853_103125 | SAMN05444853_103126 | Lipoprotein NlpD. | Membrane protein YqaA, SNARE-associated domain. | 0.737 |
SEM03215.1 | SEM03279.1 | SAMN05444853_103125 | SAMN05444853_103128 | Lipoprotein NlpD. | Fic family protein. | 0.555 |
SEM03215.1 | surE | SAMN05444853_103125 | SAMN05444853_103127 | Lipoprotein NlpD. | 5'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.742 |
SEM03239.1 | SEM03189.1 | SAMN05444853_103126 | SAMN05444853_103124 | Membrane protein YqaA, SNARE-associated domain. | Lipoprotein NlpD. | 0.673 |
SEM03239.1 | SEM03215.1 | SAMN05444853_103126 | SAMN05444853_103125 | Membrane protein YqaA, SNARE-associated domain. | Lipoprotein NlpD. | 0.737 |
SEM03239.1 | SEM03279.1 | SAMN05444853_103126 | SAMN05444853_103128 | Membrane protein YqaA, SNARE-associated domain. | Fic family protein. | 0.588 |
SEM03239.1 | SEM03331.1 | SAMN05444853_103126 | SAMN05444853_103130 | Membrane protein YqaA, SNARE-associated domain. | Hypothetical protein. | 0.477 |
SEM03239.1 | lgt | SAMN05444853_103126 | SAMN05444853_103129 | Membrane protein YqaA, SNARE-associated domain. | Phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.411 |
SEM03239.1 | surE | SAMN05444853_103126 | SAMN05444853_103127 | Membrane protein YqaA, SNARE-associated domain. | 5'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.795 |
SEM03279.1 | SEM03189.1 | SAMN05444853_103128 | SAMN05444853_103124 | Fic family protein. | Lipoprotein NlpD. | 0.507 |
SEM03279.1 | SEM03215.1 | SAMN05444853_103128 | SAMN05444853_103125 | Fic family protein. | Lipoprotein NlpD. | 0.555 |
SEM03279.1 | SEM03239.1 | SAMN05444853_103128 | SAMN05444853_103126 | Fic family protein. | Membrane protein YqaA, SNARE-associated domain. | 0.588 |
SEM03279.1 | SEM03331.1 | SAMN05444853_103128 | SAMN05444853_103130 | Fic family protein. | Hypothetical protein. | 0.488 |
SEM03279.1 | SEM24927.1 | SAMN05444853_103128 | SAMN05444853_1104 | Fic family protein. | Hypothetical protein. | 0.499 |
SEM03279.1 | dnaK | SAMN05444853_103128 | SAMN05444853_10291 | Fic family protein. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.402 |
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