Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEM05499.1Protein of unknown function. (182 aa)    
Predicted Functional Partners:
SEM05470.1
Protein of unknown function.
 
     0.943
SEM05793.1
VRR-NUC domain-containing protein.
 
     0.814
SEM05738.1
DNA polymerase.
 
     0.812
SEM05820.1
SNF2 family N-terminal domain-containing protein.
 
     0.811
SEM05439.1
Hypothetical protein.
       0.746
SEM05521.1
Hypothetical protein.
       0.709
SEM05548.1
Uncharacterized conserved protein YfdQ, DUF2303 family.
       0.676
SEM05416.1
Hypothetical protein.
       0.565
SEM05907.1
Hypothetical protein.
 
     0.487
SEM05277.1
Hypothetical protein.
 
     0.473
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.