Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEM06328.16-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (460 aa)    
Predicted Functional Partners:
SEM06181.1
PTS system, cellobiose-specific IIB component.
 
 
 0.982
SEM06232.1
PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.981
SEM06150.1
PTS system, cellobiose-specific IIA component.
 
 
 0.980
SEM19751.1
PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 
 0.953
SEM01873.1
PTS system, glucose-specific IIA component.
  
 
 0.910
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.903
SEM67465.1
Glucose-6-phosphate 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family.
     
  0.900
SEM06116.1
Lichenan operon transcriptional antiterminator.
 
  
 0.782
SEM06272.1
Hypothetical protein.
       0.773
SEM06300.1
Protein of unknown function.
       0.773
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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