Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEM07593.1PTS system, sucrose-specific IIC component. (470 aa)    
Predicted Functional Partners:
SEM01873.1
PTS system, glucose-specific IIA component.
 
 0.987
SEM01916.1
Phosphocarrier protein HPr.
  
 
 0.929
SEM06116.1
Lichenan operon transcriptional antiterminator.
 
 
 0.908
SEL91222.1
N-acetylglucosamine kinase.
  
 
 0.829
SEM07048.1
Fructokinase.
  
 
 0.829
SEM60613.1
N-acylmannosamine kinase.
  
 
 0.829
SEM26729.1
PTS hybrid protein.
  
  
 0.733
SEM06232.1
PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
  
 0.717
SEM06150.1
PTS system, cellobiose-specific IIA component.
  
  
 0.711
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling.
 
  
 0.698
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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