STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM10490.1Ecotin. (156 aa)    
Predicted Functional Partners:
SEM10458.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.
       0.757
SEM10401.1
PAP2 superfamily protein.
       0.731
SEM10426.1
Lysophospholipase, alpha-beta hydrolase superfamily.
       0.731
SEM10334.1
Hypothetical protein.
       0.715
SEM10360.1
Hypothetical protein.
       0.715
SEM10519.1
Protein of unknown function.
       0.693
SEM10545.1
Hypothetical protein.
       0.693
SEM40523.1
Hypothetical protein.
  
     0.684
SEM10571.1
DNA-3-methyladenine glycosylase I.
       0.630
SEM10606.1
methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
       0.630
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.