Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEM14082.1lactose/L-arabinose transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (350 aa)    
Predicted Functional Partners:
MalG
Maltose/maltodextrin transport system permease protein.
 
 0.991
MalF
Maltose/maltodextrin transport system permease protein.
 
 0.983
SEM54468.1
Maltose/maltodextrin transport system substrate-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
 
 0.978
SEM14004.1
Multiple sugar transport system permease protein.
 
 
 0.960
SEM14034.1
Multiple sugar transport system permease protein.
 
 
 0.954
SEM14059.1
Multiple sugar transport system substrate-binding protein.
 
 
 0.924
malK
Multiple sugar transport system ATP-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Maltooligosaccharide importer (TC 3.A.1.1.1) family.
  
  
 
0.905
SEL92078.1
Cationic peptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.742
SEM42629.1
ABC-2 type transport system permease protein.
 
    
 0.613
SEM01873.1
PTS system, glucose-specific IIA component.
   
 
 0.563
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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