Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEM19782.1Predicted dehydrogenase. (376 aa)    
Predicted Functional Partners:
iolE
Inosose dehydratase; Catalyzes the dehydration of inosose (2-keto-myo-inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi-inositol). Belongs to the IolE/MocC family.
 
 0.975
SEM19887.1
5-dehydro-2-deoxygluconokinase.
  
 0.940
SEM19907.1
5-deoxy-glucuronate isomerase.
 
  
 0.827
SEM19860.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Belongs to the TPP enzyme family.
 
  
 0.826
SEM19810.1
Myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase.
 
    
0.627
lysS
lysyl-tRNA synthetase, class 2; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.594
SEM19963.1
DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains.
 
     0.546
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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