STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM19995.1Inositol transport system substrate-binding protein. (311 aa)    
Predicted Functional Partners:
SEM20078.1
Inositol transport system permease protein.
  0.977
SEM20151.1
Two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB.
 
 
 0.963
SEM20026.1
Inositol transport system substrate-binding protein.
 
  
 
0.954
SEM20052.1
Inositol transport system ATP-binding protein.
 
  0.953
SEM26577.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.842
SEL97039.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
   0.828
SEM46964.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
   0.813
SEM46930.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
   0.790
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.785
SEM01457.1
AI-2 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
   0.771
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.