STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM20052.1Inositol transport system ATP-binding protein. (502 aa)    
Predicted Functional Partners:
SEM20078.1
Inositol transport system permease protein.
 0.985
SEM20026.1
Inositol transport system substrate-binding protein.
 
  0.961
SEM19995.1
Inositol transport system substrate-binding protein.
 
  0.953
SEL97039.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
   0.821
SEM26577.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.803
SEM46930.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
   0.794
SEM01457.1
AI-2 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
   0.770
SEM51589.1
Methyl-galactoside transport system permease protein.
  
 0.761
SEM46964.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
   0.753
SEM42629.1
ABC-2 type transport system permease protein.
 
      0.748
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.