Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEM19703.1Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (154 aa)    
Predicted Functional Partners:
SEM44074.1
Arsenite efflux pump ArsB, ACR3 family.
  
  
 0.570
SEM07222.1
Iron complex outermembrane recepter protein.
    
 
 0.527
SEL88790.1
TonB-dependent Receptor Plug Domain.
    
 
 0.498
SEM00531.1
Putative thioredoxin.
  
 
 0.489
SEM29973.1
Thioredoxin 1; Belongs to the thioredoxin family.
  
 
 0.489
SEM42258.1
Tetratricopeptide repeat-containing protein.
  
 
 0.489
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.478
SEM39419.1
Membrane protease subunit HflC; HflC and HflK could regulate a protease.
  
    0.470
engB
GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
  
    0.450
SEM20867.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
  
 0.433
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.