STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM19751.1PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. (448 aa)    
Predicted Functional Partners:
SEM06150.1
PTS system, cellobiose-specific IIA component.
 
 
 0.993
SEM06181.1
PTS system, cellobiose-specific IIB component.
 
 
 0.985
SEM54176.1
6-phospho-beta-glucosidase.
 
 
 0.962
SEM06328.1
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
 
 0.947
SEM06232.1
PTS system, cellobiose-specific IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
  
 
0.923
SEM01916.1
Phosphocarrier protein HPr.
    
  0.901
SEM06116.1
Lichenan operon transcriptional antiterminator.
 
  
 0.851
SEM19721.1
alpha-L-fucosidase.
       0.776
SEM07593.1
PTS system, sucrose-specific IIC component.
  
  
 0.733
SEM54137.1
DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains.
 
   
 0.532
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.