STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM23225.1Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA. (157 aa)    
Predicted Functional Partners:
SEM54797.1
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein.
  
     0.772
SEM21220.1
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein.
  
     0.771
SEM15058.1
Lrp/AsnC family transcriptional regulator.
  
     0.761
SEM23254.1
Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family.
       0.655
SEM22339.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.473
SEL94588.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.458
SEM23205.1
Nucleotide-binding universal stress protein, UspA family.
     
 0.411
SEM23180.1
TRAP transporter, 4TM/12TM fusion protein.
       0.407
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.