Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
UlaD3-dehydro-L-gulonate-6-phosphate decarboxylase. (225 aa)    
Predicted Functional Partners:
SEM23310.1
L-xylulose 5-phosphate 3-epimerase.
 
 
 0.988
SEM23361.1
L-ascorbate 6-phosphate lactonase.
 
  
 0.983
SEM23413.1
PTS system, ascorbate-specific IIA component.
 
  
 0.952
SEM23387.1
PTS system, ascorbate-specific IIC component.
 
  
 0.943
SEL95803.1
L-xylulokinase; Belongs to the FGGY kinase family.
 
  
  0.917
SEM26620.1
L-xylulokinase; Belongs to the FGGY kinase family.
 
  
  0.914
SEM25811.1
Arabinose-5-phosphate isomerase.
  
  
 0.808
nanE
N-acylglucosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
    0.556
SEM23283.1
L-ribulose-5-phosphate 4-epimerase.
 
  
 0.522
SEM14034.1
Multiple sugar transport system permease protein.
   
    0.451
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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