Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEL98511.1 | SEM26404.1 | SAMN05444853_102150 | SAMN05444853_11049 | Threonine synthase. | L-threonine aldolase. | 0.925 |
| SEL98511.1 | SEM52619.1 | SAMN05444853_102150 | SAMN05444853_12213 | Threonine synthase. | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.988 |
| SEL98511.1 | ilvA | SAMN05444853_102150 | SAMN05444853_1368 | Threonine synthase. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.954 |
| SEM26404.1 | SEL98511.1 | SAMN05444853_11049 | SAMN05444853_102150 | L-threonine aldolase. | Threonine synthase. | 0.925 |
| SEM26404.1 | SEM29501.1 | SAMN05444853_11049 | SAMN05444853_11162 | L-threonine aldolase. | Hypothetical protein/3-hydroxy acid dehydrogenase / malonic semialdehyde reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.903 |
| SEM26404.1 | SEM52619.1 | SAMN05444853_11049 | SAMN05444853_12213 | L-threonine aldolase. | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.449 |
| SEM26404.1 | glnS | SAMN05444853_11049 | SAMN05444853_11048 | L-threonine aldolase. | glutaminyl-tRNA synthetase. | 0.474 |
| SEM26404.1 | glyA | SAMN05444853_11049 | SAMN05444853_1381 | L-threonine aldolase. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.933 |
| SEM26404.1 | ilvA | SAMN05444853_11049 | SAMN05444853_1368 | L-threonine aldolase. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.926 |
| SEM26404.1 | ychF | SAMN05444853_11049 | SAMN05444853_10241 | L-threonine aldolase. | Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.751 |
| SEM29501.1 | SEM26404.1 | SAMN05444853_11162 | SAMN05444853_11049 | Hypothetical protein/3-hydroxy acid dehydrogenase / malonic semialdehyde reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | L-threonine aldolase. | 0.903 |
| SEM52619.1 | SEL98511.1 | SAMN05444853_12213 | SAMN05444853_102150 | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Threonine synthase. | 0.988 |
| SEM52619.1 | SEM26404.1 | SAMN05444853_12213 | SAMN05444853_11049 | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | L-threonine aldolase. | 0.449 |
| SEM52619.1 | glyA | SAMN05444853_12213 | SAMN05444853_1381 | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.501 |
| SEM52619.1 | ilvA | SAMN05444853_12213 | SAMN05444853_1368 | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.751 |
| glnS | SEM26404.1 | SAMN05444853_11048 | SAMN05444853_11049 | glutaminyl-tRNA synthetase. | L-threonine aldolase. | 0.474 |
| glyA | SEM26404.1 | SAMN05444853_1381 | SAMN05444853_11049 | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | L-threonine aldolase. | 0.933 |
| glyA | SEM52619.1 | SAMN05444853_1381 | SAMN05444853_12213 | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Aspartate kinase; In the C-terminal section; belongs to the homoserine dehydrogenase family. | 0.501 |
| glyA | ilvA | SAMN05444853_1381 | SAMN05444853_1368 | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.925 |
| ilvA | SEL98511.1 | SAMN05444853_1368 | SAMN05444853_102150 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Threonine synthase. | 0.954 |
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