Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEM26620.1L-xylulokinase; Belongs to the FGGY kinase family. (496 aa)    
Predicted Functional Partners:
dlgD
3-dehydro-L-gulonate 2-dehydrogenase; Catalyzes the reduction of 2,3-diketo-L-gulonate in the presence of NADH, to form 3-keto-L-gulonate.
 
  
  0.925
SEM23310.1
L-xylulose 5-phosphate 3-epimerase.
 
 
  0.921
UlaD
3-dehydro-L-gulonate-6-phosphate decarboxylase.
 
  
  0.914
SEL95803.1
L-xylulokinase; Belongs to the FGGY kinase family.
  
  
 
0.907
SEM23361.1
L-ascorbate 6-phosphate lactonase.
    
  0.900
SEM26649.1
Sugar (pentulose or hexulose) kinase.
 
     0.764
SEM26596.1
L-iditol 2-dehydrogenase.
 
  
 0.738
SEM26666.1
Ribitol 2-dehydrogenase.
 
     0.676
SEM01397.1
Lsr operon transcriptional repressor.
 
  
 0.633
SEM01510.1
Autoinducer 2-binding protein.
  
    0.562
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.