Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEM26729.1PTS hybrid protein. (135 aa)    
Predicted Functional Partners:
SEM01896.1
Phosphotransferase system, enzyme I, PtsI; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
 
 0.985
SEM01873.1
PTS system, glucose-specific IIA component.
 
 
 0.979
SEM06116.1
Lichenan operon transcriptional antiterminator.
 
 
 
 0.888
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
  0.811
SEM01916.1
Phosphocarrier protein HPr.
 
 
 0.794
SEM07593.1
PTS system, sucrose-specific IIC component.
  
  
 0.733
SEM10099.1
PTS system, glucose-specific IIC component.
  
  
 0.733
SEM36535.1
PTS system, N-acetylglucosamine-specific IIC component.
  
  
 0.733
SEM54207.1
PTS system, arbutin-like IIC component.
  
  
 0.733
SEL89774.1
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor.
   
 
 0.730
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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